EnhancerDB
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  3. rs149972282[chr1:27757027]
Enhancers that have rs149972282[chr1:27757027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149972282[chr1:27757027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27757010 27757030 TP63 JASPAR yes 27692653
chr1 27757011 27757029 TP73 JASPAR yes 27692654
chr1 27757015 27757036 REST JASPAR yes 27692655
chr1 27757016 27757035 REST JASPAR yes 27692656
chr1 27757021 27757031 SP1 JASPAR yes 27692657
chr1 27757024 27757029 SP1 TRANSFAC yes 27692658
Genes associated with rs149972282[chr1:27757027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More