EnhancerDB
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  3. rs149979032[chr6:112320077]
Enhancers that have rs149979032[chr6:112320077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs149979032[chr6:112320077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112320072 112320082 NFIA JASPAR yes 104396217
chr6 112320074 112320080 NFIC JASPAR yes 104396218
chr6 112320075 112320085 EMX2 JASPAR yes 104396219
chr6 112320075 112320085 EN2 JASPAR yes 104396220
chr6 112320075 112320085 ESX1 JASPAR yes 104396221
chr6 112320075 112320085 EVX1 JASPAR yes 104396222
chr6 112320075 112320085 EVX2 JASPAR yes 104396223
chr6 112320075 112320085 GBX1 JASPAR yes 104396224
chr6 112320075 112320085 GBX2 JASPAR yes 104396225
chr6 112320075 112320085 HESX1 JASPAR yes 104396226
chr6 112320075 112320085 HOXA2 JASPAR yes 104396227
chr6 112320075 112320085 HOXB3 JASPAR yes 104396228
chr6 112320075 112320085 LBX2 JASPAR yes 104396229
chr6 112320075 112320085 LHX2 JASPAR yes 104396230
chr6 112320075 112320085 MIXL1 JASPAR yes 104396231
chr6 112320075 112320085 RAX JASPAR yes 104396232
chr6 112320076 112320080 H1TF2 TRANSFAC yes 104396233
chr6 112320076 112320080 NFE TRANSFAC yes 104396234
chr6 112320076 112320080 SRF TRANSFAC yes 104396235
chr6 112320076 112320084 BARX1 JASPAR yes 104396236
chr6 112320076 112320084 BSX JASPAR yes 104396237
chr6 112320076 112320084 EN1 JASPAR yes 104396238
chr6 112320076 112320084 ISX JASPAR yes 104396239
chr6 112320076 112320084 LHX9 JASPAR yes 104396240
chr6 112320076 112320084 MSX1 JASPAR yes 104396241
chr6 112320076 112320084 MSX2 JASPAR yes 104396242
chr6 112320076 112320084 PRRX1 JASPAR yes 104396243
chr6 112320076 112320084 RAX2 JASPAR yes 104396244
chr6 112320076 112320084 SHOX JASPAR yes 104396245
Genes associated with rs149979032[chr6:112320077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More