EnhancerDB
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  3. rs149994483[chr6:109055102]
Enhancers that have rs149994483[chr6:109055102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs149994483[chr6:109055102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109055089 109055104 TFAP2A JASPAR yes 104199119
chr6 109055090 109055104 GLIS2 JASPAR yes 104199120
chr6 109055091 109055106 TFAP2C JASPAR yes 104199121
chr6 109055092 109055103 EBF1 JASPAR yes 104199122
chr6 109055098 109055113 FOXA1 JASPAR yes 104199123
chr6 109055100 109055113 POU2F2 JASPAR yes 104199124
chr6 109055100 109055114 POU1F1 JASPAR yes 104199125
chr6 109055101 109055113 POU3F1 JASPAR yes 104199126
chr6 109055101 109055113 POU3F2 JASPAR yes 104199127
chr6 109055101 109055114 POU3F3 JASPAR yes 104199128
chr6 109055102 109055106 YY1 TRANSFAC yes 104199129
chr6 109055102 109055113 FOXA1 JASPAR yes 104199130
chr6 109055102 109055114 POU2F1 JASPAR yes 104199131
Genes associated with rs149994483[chr6:109055102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More