EnhancerDB
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  3. rs150006609[chr6:108900333]
Enhancers that have rs150006609[chr6:108900333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150006609[chr6:108900333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108900319 108900333 FOXF2 JASPAR yes 104179489
chr6 108900329 108900349 RREB1 JASPAR yes 104179493
chr6 108900330 108900344 IRF7 JASPAR yes 104179494
chr6 108900332 108900347 FOXP1 JASPAR yes 104179495
chr6 108900332 108900353 IRF1 JASPAR yes 104179496
Genes associated with rs150006609[chr6:108900333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More