EnhancerDB
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  3. rs150202325[chr12:122590503]
Enhancers that have rs150202325[chr12:122590503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs150202325[chr12:122590503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122590491 122590511 TBX19 JASPAR yes 124266483
chr12 122590492 122590506 PAX6 JASPAR yes 124266485
chr12 122590493 122590509 T JASPAR yes 124266491
chr12 122590494 122590503 NKX3-2 JASPAR yes 124266492
chr12 122590495 122590503 ISL2 JASPAR yes 124266493
chr12 122590499 122590507 ISL2 JASPAR yes 124266494
chr12 122590499 122590508 NKX3-2 JASPAR yes 124266495
chr12 122590500 122590511 TBX20 JASPAR yes 124266496
chr12 122590500 122590511 TBX2 JASPAR yes 124266497
chr12 122590500 122590513 EOMES JASPAR yes 124266498
chr12 122590501 122590509 MGA JASPAR yes 124266499
chr12 122590501 122590509 TBX15 JASPAR yes 124266500
chr12 122590501 122590509 TBX1 JASPAR yes 124266501
chr12 122590501 122590509 TBX4 JASPAR yes 124266502
chr12 122590501 122590509 TBX5 JASPAR yes 124266503
chr12 122590501 122590511 TBR1 JASPAR yes 124266504
Genes associated with rs150202325[chr12:122590503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More