EnhancerDB
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  3. rs150242671[chr1:1780266]
Enhancers that have rs150242671[chr1:1780266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150242671[chr1:1780266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1780249 1780270 IRF1 JASPAR yes 26206470
chr1 1780251 1780266 PRDM1 JASPAR yes 26206471
chr1 1780262 1780268 LEF1 TRANSFAC yes 26206472
chr1 1780262 1780268 SOX10 JASPAR yes 26206473
Genes associated with rs150242671[chr1:1780266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More