EnhancerDB
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  3. rs150488978[chr1:117389373]
Enhancers that have rs150488978[chr1:117389373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs150488978[chr1:117389373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117389352 117389373 REST JASPAR yes 31843830
chr1 117389370 117389379 ZEB1 JASPAR yes 31843834
chr1 117389371 117389381 ID4 JASPAR yes 31843835
chr1 117389371 117389381 TCF3 JASPAR yes 31843836
chr1 117389371 117389381 TCF4 JASPAR yes 31843837
chr1 117389371 117389639 ZNF143 GTRD no Epithelial (MCF-7) 21333942
chr1 117389372 117389381 SNAI2 JASPAR yes 31843838
chr1 117389373 117389378 USF2 TRANSFAC yes 31843839
Genes associated with rs150488978[chr1:117389373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More