EnhancerDB
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  3. rs150552225[chr1:226845030]
Enhancers that have rs150552225[chr1:226845030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150552225[chr1:226845030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226845020 226845035 PRDM1 JASPAR yes 35828596
chr1 226845020 226845035 STAT2 JASPAR yes 35828597
chr1 226845021 226845035 STAT1 JASPAR yes 35828598
chr1 226845022 226845036 IRF7 JASPAR yes 35828599
chr1 226845022 226845036 IRF8 JASPAR yes 35828600
chr1 226845022 226845037 IRF9 JASPAR yes 35828601
chr1 226845027 226845031 YY1 TRANSFAC yes 35828602
Genes associated with rs150552225[chr1:226845030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More