EnhancerDB
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  3. rs150560230[chr17:78639132]
Enhancers that have rs150560230[chr17:78639132]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs150560230[chr17:78639132]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78639115 78639136 IRF1 JASPAR yes 56264792
chr17 78639116 78639137 IRF1 JASPAR yes 56264794
chr17 78639117 78639132 STAT2 JASPAR yes 56264795
chr17 78639120 78639138 IRF2 JASPAR yes 56264796
chr17 78639120 78639141 ZNF263 JASPAR yes 56264797
chr17 78639121 78639136 FOXP1 JASPAR yes 56264798
chr17 78639121 78639142 IRF1 JASPAR yes 56264799
chr17 78639123 78639138 PRDM1 JASPAR yes 56264800
chr17 78639124 78639145 ZNF263 JASPAR yes 56264801
chr17 78639125 78639146 ZNF263 JASPAR yes 56264802
chr17 78639127 78639148 IRF1 JASPAR yes 56264803
chr17 78639128 78639149 ZNF263 JASPAR yes 56264804
chr17 78639129 78639144 PRDM1 JASPAR yes 56264805
chr17 78639129 78639144 STAT2 JASPAR yes 56264806
chr17 78639129 78639150 ZNF263 JASPAR yes 56264807
chr17 78639130 78639151 ZNF263 JASPAR yes 56264808
chr17 78639132 78639153 IRF1 JASPAR yes 56264809
Genes associated with rs150560230[chr17:78639132], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More