EnhancerDB
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  3. rs150604788[chr1:23439438]
Enhancers that have rs150604788[chr1:23439438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs150604788[chr1:23439438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23439437 23439452 HNF4A JASPAR yes 27413730
chr1 23439438 23439452 RXRB JASPAR yes 27413731
chr1 23439438 23439452 RXRG JASPAR yes 27413732
chr1 23439438 23439453 HNF4G JASPAR yes 27413733
Genes associated with rs150604788[chr1:23439438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More