EnhancerDB
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  3. rs150897554[chr5:172209906]
Enhancers that have rs150897554[chr5:172209906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs150897554[chr5:172209906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172209592 172210082 EP300 UCSC Txn Factor no Conserved 108537496
chr5 172209618 172210046 TCF12 UCSC Txn Factor no Conserved 108537498
chr5 172209737 172210047 NR3C1 UCSC Txn Factor no Conserved 108537502
chr5 172209893 172209911 MAFF JASPAR yes 67826099
chr5 172209895 172209906 NRL JASPAR yes 67826100
chr5 172209895 172209910 MAFK JASPAR yes 67826101
Genes associated with rs150897554[chr5:172209906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More