EnhancerDB
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  3. rs150972065[chr1:173398020]
Enhancers that have rs150972065[chr1:173398020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs150972065[chr1:173398020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173398010 173398022 HES7 JASPAR yes 33199302
chr1 173398010 173398022 PKNOX1 JASPAR yes 33199303
chr1 173398010 173398022 PKNOX2 JASPAR yes 33199304
chr1 173398010 173398022 TGIF2 JASPAR yes 33199305
chr1 173398011 173398020 SNAI2 JASPAR yes 33199306
chr1 173398011 173398021 HEY2 JASPAR yes 33199307
chr1 173398011 173398021 ID4 JASPAR yes 33199308
chr1 173398011 173398021 TCF4 JASPAR yes 33199309
Genes associated with rs150972065[chr1:173398020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More