EnhancerDB
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  3. rs151115138[chr12:116959780]
Enhancers that have rs151115138[chr12:116959780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs151115138[chr12:116959780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116959710 116960734 ZNF274 GTRD no Blood (GM12878) 21577187
chr12 116959765 116960375 ZBTB33 GTRD no Brain (SK-N-SH) 21577188
chr12 116959769 116959786 RARA JASPAR yes 124005957
chr12 116959771 116959782 USF1 JASPAR yes 124005958
chr12 116959771 116959782 USF2 JASPAR yes 124005959
chr12 116959772 116959782 SREBF2 JASPAR yes 124005960
chr12 116959777 116959790 NR2F1 JASPAR yes 124005962
chr12 116959778 116959786 CREB1 JASPAR yes 124005963
Genes associated with rs151115138[chr12:116959780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More