EnhancerDB
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  3. rs151143939[chr12:65042938]
Enhancers that have rs151143939[chr12:65042938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs151143939[chr12:65042938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65042933 65042943 ALX3 JASPAR yes 121420647
chr12 65042933 65042943 ESX1 JASPAR yes 121420648
chr12 65042933 65042943 GBX1 JASPAR yes 121420649
chr12 65042933 65042943 GBX2 JASPAR yes 121420650
chr12 65042933 65042943 GSX1 JASPAR yes 121420651
chr12 65042933 65042943 GSX2 JASPAR yes 121420652
chr12 65042933 65042943 HESX1 JASPAR yes 121420653
chr12 65042933 65042943 HOXB3 JASPAR yes 121420654
chr12 65042933 65042943 LBX2 JASPAR yes 121420655
chr12 65042933 65042943 LHX2 JASPAR yes 121420656
chr12 65042933 65042943 MIXL1 JASPAR yes 121420657
chr12 65042933 65042943 RAX JASPAR yes 121420658
chr12 65042934 65042942 BARX1 JASPAR yes 121420659
chr12 65042934 65042942 BSX JASPAR yes 121420660
chr12 65042934 65042942 EN1 JASPAR yes 121420661
chr12 65042934 65042942 ISX JASPAR yes 121420662
chr12 65042934 65042942 LHX9 JASPAR yes 121420663
chr12 65042934 65042942 MSX1 JASPAR yes 121420664
chr12 65042934 65042942 MSX2 JASPAR yes 121420665
chr12 65042934 65042942 PRRX1 JASPAR yes 121420666
chr12 65042934 65042942 RAX2 JASPAR yes 121420667
chr12 65042934 65042942 SHOX JASPAR yes 121420668
chr12 65042934 65042943 VENTX JASPAR yes 121420669
Genes associated with rs151143939[chr12:65042938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More