EnhancerDB
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  3. rs151288054[chr1:230282242]
Enhancers that have rs151288054[chr1:230282242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230280348 230284066 vista144
VISTA
Transcript factors that have rs151288054[chr1:230282242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230281877 230282247 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21391547
chr1 230281877 230282247 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878777
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 21391554
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 107878785
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 21391555
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 107878786
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 21391556
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 107878787
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 21391557
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 107878788
chr1 230282240 230282249 SNAI2 JASPAR yes 36026453
chr1 230282240 230282249 SNAI2 JASPAR yes 71161078
chr1 230282240 230282250 ID4 JASPAR yes 36026454
chr1 230282240 230282250 NHLH1 JASPAR yes 36026455
chr1 230282240 230282250 TCF3 JASPAR yes 36026456
chr1 230282240 230282250 TCF4 JASPAR yes 36026457
chr1 230282240 230282250 ID4 JASPAR yes 71161079
chr1 230282240 230282250 NHLH1 JASPAR yes 71161080
chr1 230282240 230282250 TCF3 JASPAR yes 71161081
chr1 230282240 230282250 TCF4 JASPAR yes 71161082
chr1 230282242 230282251 ZEB1 JASPAR yes 36026458
chr1 230282242 230282251 ZEB1 JASPAR yes 71161083
Genes associated with rs151288054[chr1:230282242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More