EnhancerDB
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  3. rs151290409[chr5:172286973]
Enhancers that have rs151290409[chr5:172286973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs151290409[chr5:172286973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172286961 172286977 POU4F2 JASPAR yes 67835782
chr5 172286961 172286977 POU4F3 JASPAR yes 67835783
chr5 172286963 172286977 POU4F1 JASPAR yes 67835784
chr5 172286964 172286974 HOXB2 JASPAR yes 67835785
chr5 172286964 172286974 HOXB3 JASPAR yes 67835786
chr5 172286964 172286974 MNX1 JASPAR yes 67835787
chr5 172286964 172286974 POU6F1 JASPAR yes 67835788
chr5 172286965 172286973 LMX1A JASPAR yes 67835789
chr5 172286965 172286973 LMX1B JASPAR yes 67835790
chr5 172286965 172286973 NKX6-1 JASPAR yes 67835791
chr5 172286965 172286973 NKX6-2 JASPAR yes 67835792
chr5 172286965 172286973 VAX1 JASPAR yes 67835793
chr5 172286965 172286973 VAX2 JASPAR yes 67835794
chr5 172286965 172286973 VSX1 JASPAR yes 67835795
chr5 172286965 172286973 VSX2 JASPAR yes 67835796
Genes associated with rs151290409[chr5:172286973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More