EnhancerDB
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  3. rs153412[chr5:153732858]
Enhancers that have rs153412[chr5:153732858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153729285 153755555 enh38536
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs153412[chr5:153732858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153732848 153732864 GLIS1 JASPAR yes 67027859
chr5 153732848 153732868 RREB1 JASPAR yes 67027860
chr5 153732849 153732863 GLIS2 JASPAR yes 67027861
Genes associated with rs153412[chr5:153732858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More