EnhancerDB
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  3. rs1541596[chr19:10987013]
Enhancers that have rs1541596[chr19:10987013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1541596[chr19:10987013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10985748 10987286 ZNF143 GTRD no Epithelial (MCF-7) 21849091
chr19 10985748 10987286 ZNF143 GTRD no Epithelial (MCF-7) 108384161
chr19 10986908 10987344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849092
chr19 10986908 10987344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384162
chr19 10986914 10987350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849093
chr19 10986914 10987350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384163
chr19 10986991 10987267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849094
chr19 10986991 10987267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384164
chr19 10987004 10987016 FOXI1 JASPAR yes 112441727
chr19 10987008 10987029 REST JASPAR yes 112441729
Genes associated with rs1541596[chr19:10987013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More