EnhancerDB
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  3. rs1546264[chr1:19775566]
Enhancers that have rs1546264[chr1:19775566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1546264[chr1:19775566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19775557 19775569 NHLH1 JASPAR yes 27191770
chr1 19775558 19775568 MSC JASPAR yes 27191771
chr1 19775564 19775576 TAL1 JASPAR yes 27191772
chr1 19775566 19775578 TAL1 JASPAR yes 27191773
Genes associated with rs1546264[chr1:19775566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More