EnhancerDB
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  3. rs1557456[chr11:122588485]
Enhancers that have rs1557456[chr11:122588485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr11 122587982 122588633 vista11881
VISTA
Transcript factors that have rs1557456[chr11:122588485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122588075 122588595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004409
chr11 122588129 122588539 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004410
chr11 122588174 122588584 RUNX3 UCSC Txn Factor no Conserved 108004412
chr11 122588174 122588584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004413
chr11 122588228 122588518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004414
chr11 122588239 122588503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004415
chr11 122588239 122588515 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004416
chr11 122588247 122588567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004417
chr11 122588302 122588666 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004418
chr11 122588343 122588619 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004419
chr11 122588382 122588642 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004420
chr11 122588475 122588495 PPARG JASPAR yes 42023711
chr11 122588475 122588495 PPARG JASPAR yes 114146314
chr11 122588485 122588489 ESR1 TRANSFAC yes 42023713
chr11 122588485 122588489 ESR1 TRANSFAC yes 114146316
Genes associated with rs1557456[chr11:122588485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More