EnhancerDB
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  3. rs1561025[chr3:149278300]
Enhancers that have rs1561025[chr3:149278300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149269565 149284575 enh21021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Breast Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs1561025[chr3:149278300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149278299 149278309 ALX3 JASPAR yes 6505341
chr3 149278299 149278309 EMX1 JASPAR yes 6505342
chr3 149278299 149278309 EMX2 JASPAR yes 6505343
chr3 149278299 149278309 ESX1 JASPAR yes 6505344
chr3 149278299 149278309 GSX1 JASPAR yes 6505345
chr3 149278299 149278309 GSX2 JASPAR yes 6505346
chr3 149278299 149278309 HOXB2 JASPAR yes 6505347
chr3 149278299 149278309 HOXB3 JASPAR yes 6505348
chr3 149278299 149278309 LBX2 JASPAR yes 6505349
chr3 149278299 149278309 LHX2 JASPAR yes 6505350
chr3 149278299 149278309 LHX6 JASPAR yes 6505351
chr3 149278299 149278309 MEOX2 JASPAR yes 6505352
chr3 149278299 149278309 MIXL1 JASPAR yes 6505353
chr3 149278299 149278309 MNX1 JASPAR yes 6505354
chr3 149278299 149278309 NOTO JASPAR yes 6505355
chr3 149278299 149278309 POU6F1 JASPAR yes 6505356
chr3 149278299 149278309 RAX JASPAR yes 6505357
chr3 149278300 149278308 BSX JASPAR yes 6505358
chr3 149278300 149278308 DLX6 JASPAR yes 6505359
chr3 149278300 149278308 EN1 JASPAR yes 6505360
chr3 149278300 149278308 ISX JASPAR yes 6505361
chr3 149278300 149278308 LBX1 JASPAR yes 6505362
chr3 149278300 149278308 LHX9 JASPAR yes 6505363
chr3 149278300 149278308 LMX1A JASPAR yes 6505364
chr3 149278300 149278308 LMX1B JASPAR yes 6505365
chr3 149278300 149278308 NKX6-1 JASPAR yes 6505366
chr3 149278300 149278308 NKX6-2 JASPAR yes 6505367
chr3 149278300 149278308 PAX4 JASPAR yes 6505368
chr3 149278300 149278308 PDX1 JASPAR yes 6505369
chr3 149278300 149278308 PRRX1 JASPAR yes 6505370
chr3 149278300 149278308 RAX2 JASPAR yes 6505371
chr3 149278300 149278308 SHOX JASPAR yes 6505372
chr3 149278300 149278308 UNCX JASPAR yes 6505373
chr3 149278300 149278308 VAX1 JASPAR yes 6505374
chr3 149278300 149278308 VAX2 JASPAR yes 6505375
chr3 149278300 149278308 VSX1 JASPAR yes 6505376
chr3 149278300 149278308 VSX2 JASPAR yes 6505377
chr3 149278300 149278313 DUXA JASPAR yes 6505378
Genes associated with rs1561025[chr3:149278300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More