EnhancerDB
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Enhancers that have rs1563966[chr17:2095954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr17 2095819 2096093 vista23701
VISTA
Transcript factors that have rs1563966[chr17:2095954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2094510 2096243 ZNF274 GTRD no Blood (GM12878) 21739523
chr17 2094510 2096243 ZNF274 GTRD no Blood (GM12878) 108230214
chr17 2095631 2096207 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739526
chr17 2095631 2096207 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230219
chr17 2095670 2096026 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108230220
chr17 2095684 2097160 ZNF274 GTRD no Blood (GM12878) 21739527
chr17 2095684 2097160 ZNF274 GTRD no Blood (GM12878) 108230221
chr17 2095693 2096209 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108230222
chr17 2095716 2096186 GATA2 UCSC Txn Factor no Conserved 108230223
chr17 2095746 2096110 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108230224
chr17 2095762 2096302 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739528
chr17 2095762 2096302 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230225
chr17 2095814 2096210 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108230226
chr17 2095817 2096253 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739529
chr17 2095817 2096253 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230227
chr17 2095819 2096125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108230228
chr17 2095825 2096135 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108230229
chr17 2095841 2096161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108230230
chr17 2095845 2096360 FOS UCSC Txn Factor no Conserved 108230231
chr17 2095886 2096116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108230232
chr17 2095893 2096257 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21739530
chr17 2095893 2096257 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108230233
chr17 2095906 2096054 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739531
chr17 2095906 2096054 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230234
chr17 2095907 2096183 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108230235
chr17 2095920 2096224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21739532
chr17 2095920 2096224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108230236
chr17 2095921 2096437 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108230237
chr17 2095936 2096147 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21739533
chr17 2095936 2096147 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108230238
chr17 2095948 2095954 ETS1 JASPAR yes 21183759
chr17 2095948 2095954 ETS1 JASPAR yes 52734823
Genes associated with rs1563966[chr17:2095954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More