EnhancerDB
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  3. rs1571466[chr1:23449183]
Enhancers that have rs1571466[chr1:23449183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
chr1 23448967 23449247 vista733
VISTA
Transcript factors that have rs1571466[chr1:23449183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23449168 23449183 MEF2C JASPAR yes 27415374
chr1 23449168 23449183 MEF2C JASPAR yes 118248972
chr1 23449169 23449184 MEF2A JASPAR yes 27415375
chr1 23449169 23449184 MEF2A JASPAR yes 118248973
chr1 23449176 23449190 POU4F1 JASPAR yes 27415380
chr1 23449176 23449190 POU4F1 JASPAR yes 118248978
chr1 23449176 23449191 HNF1A JASPAR yes 27415381
chr1 23449176 23449191 HNF1A JASPAR yes 118248979
chr1 23449177 23449190 HNF1B JASPAR yes 27415382
chr1 23449177 23449190 HNF1B JASPAR yes 118248980
Genes associated with rs1571466[chr1:23449183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More