EnhancerDB
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  3. rs1572787[chr1:24616572]
Enhancers that have rs1572787[chr1:24616572]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1572787[chr1:24616572]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24616564 24616578 EBF1 JASPAR yes 27496564
chr1 24616565 24616576 EBF1 JASPAR yes 27496565
chr1 24616566 24616577 EBF1 JASPAR yes 27496566
Genes associated with rs1572787[chr1:24616572], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More