EnhancerDB
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  3. rs1621597[chr15:42210393]
Enhancers that have rs1621597[chr15:42210393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1621597[chr15:42210393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42210380 42210393 SMAD2 JASPAR yes 23005031
chr15 42210384 42210398 TLX1 JASPAR yes 23005032
chr15 42210385 42210399 TLX1 JASPAR yes 23005033
chr15 42210388 42210403 NFYB JASPAR yes 23005034
chr15 42210390 42210406 NFYA JASPAR yes 23005035
Genes associated with rs1621597[chr15:42210393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More