EnhancerDB
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  3. rs1641912[chr16:29154796]
Enhancers that have rs1641912[chr16:29154796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1641912[chr16:29154796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29154258 29154828 ZNF274 GTRD no Liver (HepG2) 21701726
chr16 29154776 29154797 IRF1 JASPAR yes 10244530
chr16 29154780 29154801 IRF1 JASPAR yes 10244531
chr16 29154782 29154797 PRDM1 JASPAR yes 10244532
chr16 29154782 29154797 STAT2 JASPAR yes 10244533
chr16 29154783 29154797 SPIC JASPAR yes 10244534
chr16 29154783 29154797 STAT1 JASPAR yes 10244535
chr16 29154784 29154798 IRF7 JASPAR yes 10244536
chr16 29154784 29154798 IRF8 JASPAR yes 10244537
chr16 29154784 29154799 IRF9 JASPAR yes 10244538
chr16 29154784 29154805 IRF1 JASPAR yes 10244539
chr16 29154785 29154800 FOXP1 JASPAR yes 10244540
chr16 29154785 29154806 IRF1 JASPAR yes 10244541
chr16 29154786 29154801 PRDM1 JASPAR yes 10244542
chr16 29154786 29154807 IRF1 JASPAR yes 10244543
chr16 29154790 29154811 IRF1 JASPAR yes 10244544
chr16 29154791 29154806 FOXP1 JASPAR yes 10244545
chr16 29154793 29154808 FOXP1 JASPAR yes 10244546
chr16 29154795 29154810 FOXP1 JASPAR yes 10244547
chr16 29154796 29154811 FOXP1 JASPAR yes 10244548
Genes associated with rs1641912[chr16:29154796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More