EnhancerDB
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  3. rs1643601[chr5:172444659]
Enhancers that have rs1643601[chr5:172444659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1643601[chr5:172444659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172444658 172444670 IRF1 JASPAR yes 67848725
Genes associated with rs1643601[chr5:172444659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More