EnhancerDB
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  3. rs1648817[chr15:42206204]
Enhancers that have rs1648817[chr15:42206204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1648817[chr15:42206204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42206193 42206206 EOMES JASPAR yes 23004337
chr15 42206195 42206205 TBR1 JASPAR yes 23004338
chr15 42206195 42206206 TBX20 JASPAR yes 23004339
chr15 42206195 42206206 TBX2 JASPAR yes 23004340
chr15 42206196 42206206 TBX21 JASPAR yes 23004341
chr15 42206197 42206205 MGA JASPAR yes 23004342
chr15 42206197 42206205 TBX1 JASPAR yes 23004343
Genes associated with rs1648817[chr15:42206204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More