EnhancerDB
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  3. rs1658388[chr3:58052117]
Enhancers that have rs1658388[chr3:58052117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1658388[chr3:58052117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58052105 58052119 RORA JASPAR yes 2671913
chr3 58052115 58052130 MEF2A JASPAR yes 2671917
chr3 58052116 58052131 MEF2C JASPAR yes 2671918
chr3 58052117 58052129 MEF2A JASPAR yes 2671919
chr3 58052117 58052129 MEF2B JASPAR yes 2671920
chr3 58052117 58052129 MEF2D JASPAR yes 2671921
Genes associated with rs1658388[chr3:58052117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More