EnhancerDB
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  3. rs1660558[chr1:234864068]
Enhancers that have rs1660558[chr1:234864068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1660558[chr1:234864068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234862633 234864418 ZNF274 GTRD no Bone Marrow (K562) 21396696
chr1 234862709 234864114 AR GTRD no Prostate (PC-3) 21396701
chr1 234862879 234864401 ZNF274 GTRD no Bone Marrow (K562) 21396716
chr1 234862971 234864329 ZNF274 GTRD no Bone Marrow (K562) 21396720
chr1 234863881 234864277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396728
chr1 234863884 234864340 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396729
chr1 234863911 234864275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396730
chr1 234863948 234864232 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396731
chr1 234863959 234864215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396732
chr1 234863963 234864193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396733
chr1 234863969 234864455 ZNF274 GTRD no Bone Marrow (K562) 21396734
chr1 234863971 234864215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396735
chr1 234863971 234864335 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396736
chr1 234864025 234864229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396737
chr1 234864026 234864312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396738
chr1 234864028 234864103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21396739
chr1 234864062 234864075 SCRT2 JASPAR yes 36308225
chr1 234864062 234864077 SCRT1 JASPAR yes 36308226
chr1 234864065 234864081 SOX4 JASPAR yes 36308227
chr1 234864066 234864081 SOX21 JASPAR yes 36308228
Genes associated with rs1660558[chr1:234864068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More