EnhancerDB
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  3. rs1672877[chr12:125261208]
Enhancers that have rs1672877[chr12:125261208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1672877[chr12:125261208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125260536 125261298 ZNF143 GTRD no Epithelial (MCF-7) 21583118
chr12 125260663 125261419 ZNF143 GTRD no Epithelial (MCF-7) 21583119
chr12 125260678 125261470 ZNF143 GTRD no Epithelial (MCF-7) 21583120
chr12 125260711 125261220 ZBTB33 GTRD no Lung (A549) 21583122
chr12 125260748 125261222 ZNF143 GTRD no Epithelial (MCF-7) 21583123
chr12 125260754 125261425 ZNF143 GTRD no Epithelial (MCF-7) 21583124
chr12 125260801 125261256 ZNF143 GTRD no Epithelial (MCF-7) 21583126
chr12 125260814 125261218 ZBTB33 GTRD no Lung (A549) 21583127
chr12 125260871 125261408 ZNF274 GTRD no Liver (HepG2) 21583128
chr12 125260900 125261324 ZNF143 GTRD no Epithelial (MCF-7) 21583129
chr12 125260939 125261310 ZNF143 GTRD no Epithelial (MCF-7) 21583130
chr12 125261204 125261214 CUX1 JASPAR yes 124421041
Genes associated with rs1672877[chr12:125261208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More