EnhancerDB
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  3. rs1672903[chr12:125222550]
Enhancers that have rs1672903[chr12:125222550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1672903[chr12:125222550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125222502 125222858 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582502
chr12 125222543 125222554 ESRRA JASPAR yes 124415687
chr12 125222545 125222557 TFAP2A JASPAR yes 124415688
chr12 125222545 125222557 TFAP2B JASPAR yes 124415689
chr12 125222545 125222557 TFAP2C JASPAR yes 124415690
chr12 125222545 125222560 TFAP2A JASPAR yes 124415691
chr12 125222545 125222560 TFAP2C JASPAR yes 124415692
Genes associated with rs1672903[chr12:125222550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More