EnhancerDB
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  3. rs16828004[chr1:23447818]
Enhancers that have rs16828004[chr1:23447818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs16828004[chr1:23447818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23447812 23447820 LBX1 JASPAR yes 27415037
chr1 23447816 23447829 POU2F2 JASPAR yes 27415038
chr1 23447816 23447830 POU1F1 JASPAR yes 27415039
chr1 23447817 23447829 POU3F1 JASPAR yes 27415040
chr1 23447817 23447829 POU3F2 JASPAR yes 27415041
chr1 23447817 23447830 POU3F3 JASPAR yes 27415042
Genes associated with rs16828004[chr1:23447818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More