EnhancerDB
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  3. rs16829990[chr1:25090299]
Enhancers that have rs16829990[chr1:25090299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16829990[chr1:25090299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25090298 25090312 POU4F1 JASPAR yes 27528401
chr1 25090298 25090314 POU4F2 JASPAR yes 27528402
chr1 25090298 25090314 POU4F3 JASPAR yes 27528403
Genes associated with rs16829990[chr1:25090299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More