EnhancerDB
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  3. rs16843362[chr1:234637789]
Enhancers that have rs16843362[chr1:234637789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16843362[chr1:234637789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234637784 234637793 SRY JASPAR yes 36279830
chr1 234637785 234637799 POU1F1 JASPAR yes 36279831
chr1 234637786 234637794 FOXO3 JASPAR yes 36279832
Genes associated with rs16843362[chr1:234637789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 235490665 235507847 + GGPS1 ENSG00000152904.7 235490665 852876 Stomach 0.392648 1968