EnhancerDB
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  3. rs16846357[chr1:226852553]
Enhancers that have rs16846357[chr1:226852553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226852222 226852636 vista5369
VISTA
Transcript factors that have rs16846357[chr1:226852553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226852479 226852593 FOXA1 UCSC Txn Factor no Conserved 107875908
chr1 226852541 226852556 FOXA1 JASPAR yes 35829671
chr1 226852541 226852556 FOXA1 JASPAR yes 118471770
chr1 226852544 226852555 FOXB1 JASPAR yes 35829672
chr1 226852544 226852555 FOXC1 JASPAR yes 35829673
chr1 226852544 226852555 FOXB1 JASPAR yes 118471771
chr1 226852544 226852555 FOXC1 JASPAR yes 118471772
chr1 226852545 226852556 FOXA1 JASPAR yes 35829675
chr1 226852545 226852556 FOXA1 JASPAR yes 118471774
chr1 226852550 226852565 ZIC4 JASPAR yes 35829676
chr1 226852550 226852565 ZIC4 JASPAR yes 118471775
chr1 226852551 226852565 ZIC1 JASPAR yes 35829677
chr1 226852551 226852565 ZIC1 JASPAR yes 118471776
Genes associated with rs16846357[chr1:226852553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More