EnhancerDB
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  3. rs16846378[chr1:226872143]
Enhancers that have rs16846378[chr1:226872143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16846378[chr1:226872143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875965
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875966
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875967
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875968
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 21387087
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875974
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875975
chr1 226871537 226872715 ZNF274 GTRD no Bone Marrow (K562) 107876168
chr1 226871547 226872330 TCF7L2 GTRD no Colon (HCT116) 21387185
chr1 226871547 226872330 TCF7L2 GTRD no Colon (HCT116) 107876169
chr1 226871808 226872367 ZNF274 GTRD no Bone Marrow (K562) 107876170
chr1 226872137 226872149 YY1 JASPAR yes 35832626
Genes associated with rs16846378[chr1:226872143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More