EnhancerDB
  1. Home
  2. SNP
  3. rs16858519[chr1:182056375]
Enhancers that have rs16858519[chr1:182056375]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs16858519[chr1:182056375]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182056079 182056416 ZNF274 GTRD no Bone Marrow (K562) 21356901
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 21356902
chr1 182056098 182057190 ZNF143 GTRD no Epithelial (MCF-7) 107849827
chr1 182056145 182057480 TCF7L2 GTRD no Colon (HCT116) 107849828
chr1 182056195 182057406 ZNF274 GTRD no Blood (GM12878) 107849829
chr1 182056213 182056763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21356903
chr1 182056213 182056763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107849830
chr1 182056270 182057000 TCF7L2 GTRD no Colon (HCT116) 107849831
chr1 182056363 182056377 TCF7L2 JASPAR yes 33588599
chr1 182056366 182056380 PAX6 JASPAR yes 33588600
chr1 182056371 182056382 E2F6 JASPAR yes 33588601
Genes associated with rs16858519[chr1:182056375], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More