EnhancerDB
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  3. rs16862754[chr1:19754986]
Enhancers that have rs16862754[chr1:19754986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16862754[chr1:19754986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19754985 19755001 RFX2 JASPAR yes 27188917
chr1 19754985 19755001 RFX3 JASPAR yes 27188918
chr1 19754985 19755001 RFX4 JASPAR yes 27188919
Genes associated with rs16862754[chr1:19754986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More