EnhancerDB
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  3. rs16862800[chr1:19796142]
Enhancers that have rs16862800[chr1:19796142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16862800[chr1:19796142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19795735 19796459 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802306
chr1 19796126 19796143 ESR1 JASPAR yes 27194908
chr1 19796126 19796143 ESR1 JASPAR yes 118243550
chr1 19796126 19796144 ESR2 JASPAR yes 27194909
chr1 19796126 19796144 ESR2 JASPAR yes 118243551
Genes associated with rs16862800[chr1:19796142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More