EnhancerDB
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  3. rs16875558[chr5:77807408]
Enhancers that have rs16875558[chr5:77807408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77807354 77807759 vista48139
VISTA
Transcript factors that have rs16875558[chr5:77807408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77807391 77807410 REST JASPAR yes 63594707
chr5 77807391 77807410 REST JASPAR yes 70668242
chr5 77807405 77807417 INSM1 JASPAR yes 63594709
chr5 77807405 77807417 INSM1 JASPAR yes 70668244
Genes associated with rs16875558[chr5:77807408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More