EnhancerDB
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  3. rs16875656[chr5:77909787]
Enhancers that have rs16875656[chr5:77909787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16875656[chr5:77909787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77909782 77909796 EBF1 JASPAR yes 63606801
chr5 77909783 77909798 TFAP2C JASPAR yes 63606802
chr5 77909784 77909795 EBF1 JASPAR yes 63606803
chr5 77909784 77909795 TFAP2A JASPAR yes 63606804
chr5 77909784 77909795 TFAP2B JASPAR yes 63606805
chr5 77909784 77909795 TFAP2C JASPAR yes 63606806
chr5 77909785 77909794 TFAP2A JASPAR yes 63606807
Genes associated with rs16875656[chr5:77909787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More