EnhancerDB
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  3. rs16897900[chr6:30755893]
Enhancers that have rs16897900[chr6:30755893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30755729 30756010 vista51545
VISTA
Transcript factors that have rs16897900[chr6:30755893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30755766 30756022 CEBPB UCSC Txn Factor no Conserved 108539547
chr6 30755882 30755898 E2F2 JASPAR yes 70344676
chr6 30755882 30755898 E2F2 JASPAR yes 101049788
chr6 30755888 30755899 CDX2 JASPAR yes 70344677
chr6 30755888 30755899 CDX2 JASPAR yes 101049789
chr6 30755890 30755899 CDX1 JASPAR yes 70344678
chr6 30755890 30755899 CDX1 JASPAR yes 101049790
Genes associated with rs16897900[chr6:30755893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More