EnhancerDB
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  3. rs16921729[chr10:21607523]
Enhancers that have rs16921729[chr10:21607523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21600793 21610695 enh1132
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16921729[chr10:21607523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21607269 21607789 SOX2 GTRD no Neural Stem Cells (H9) 21420810
chr10 21607304 21607844 SOX2 GTRD no Neural Stem Cells (H9) 21420811
chr10 21607370 21607632 ZNF143 GTRD no Epithelial (MCF-7) 21420812
chr10 21607379 21607771 SOX2 GTRD no Neural Stem Cells (H9) 21420813
chr10 21607399 21607760 SOX2 GTRD no Neural Stem Cells (H9) 21420814
Genes associated with rs16921729[chr10:21607523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More