EnhancerDB
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  3. rs16939953[chr17:43368600]
Enhancers that have rs16939953[chr17:43368600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16939953[chr17:43368600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43366652 43370488 ZNF274 GTRD no Blood (GM12878) 21763788
chr17 43366660 43370501 ZNF274 GTRD no Liver (HepG2) 21763789
chr17 43366695 43369600 ZNF274 GTRD no Blood (GM12878) 21763791
chr17 43366712 43368946 TCF7L2 GTRD no Colon (HCT116) 21763792
chr17 43366878 43368965 ZNF274 GTRD no Bone Marrow (K562) 21763793
chr17 43366904 43369658 TCF7L2 GTRD no Colon (HCT116) 21763794
chr17 43366944 43369466 ZNF143 GTRD no Epithelial (MCF-7) 21763795
chr17 43366949 43369794 ZNF274 GTRD no Blood (GM12878) 21763796
chr17 43367073 43368673 ZNF274 GTRD no Blood (GM12878) 21763798
chr17 43367081 43370470 ZNF274 GTRD no Blood (GM12878) 21763799
chr17 43367103 43370279 ZNF274 GTRD no Blood (GM12878) 21763800
chr17 43367185 43370159 ZNF274 GTRD no Blood (GM12878) 21763802
chr17 43367220 43368617 ZNF274 GTRD no Cervix (HeLa-S3) 21763803
chr17 43367230 43368607 ZNF274 GTRD no Cervix (HeLa-S3) 21763805
chr17 43367244 43370197 ZNF274 GTRD no Blood (GM12878) 21763806
chr17 43367267 43369131 TCF7L2 GTRD no Colon (HCT116) 21763807
chr17 43367276 43370195 ZNF274 GTRD no Blood (GM12878) 21763808
chr17 43367280 43370914 ZNF274 GTRD no Liver (HepG2) 21763809
chr17 43367285 43369507 ZBTB33 GTRD no Brain (SK-N-SH) 21763810
chr17 43367294 43369726 ZNF274 GTRD no Blood (GM12878) 21763812
chr17 43367302 43369782 ZNF274 GTRD no Liver (HepG2) 21763814
chr17 43367330 43369613 ZNF274 GTRD no Liver (HepG2) 21763816
chr17 43367356 43369648 ZNF274 GTRD no Blood (GM12878) 21763819
chr17 43367357 43370169 ZNF274 GTRD no Blood (GM12878) 21763820
chr17 43367359 43368616 ZNF274 GTRD no Blood (GM12878) 21763821
chr17 43367359 43368722 ZNF274 GTRD no Blood (GM12878) 21763822
chr17 43367362 43368943 ZNF274 GTRD no Blood (GM12878) 21763823
chr17 43367374 43369503 ZBTB33 GTRD no Brain (SK-N-SH) 21763825
chr17 43367422 43369780 ZNF274 GTRD no Liver (HepG2) 21763834
chr17 43367424 43368649 ZNF274 GTRD no Bone Marrow (K562) 21763836
chr17 43367426 43369577 ZNF274 GTRD no Cervix (HeLa-S3) 21763837
chr17 43367428 43370153 ZNF274 GTRD no Liver (HepG2) 21763838
chr17 43367428 43370421 ZNF274 GTRD no Liver (HepG2) 21763839
chr17 43367431 43368630 ZNF274 GTRD no Blood (GM12878) 21763840
chr17 43367433 43369691 ZNF274 GTRD no Blood (GM12878) 21763841
chr17 43367438 43370106 ZNF274 GTRD no Cervix (HeLa-S3) 21763843
chr17 43367442 43368734 ZNF274 GTRD no Cervix (HeLa-S3) 21763846
chr17 43367453 43369003 ZNF143 GTRD no Epithelial (MCF-7) 21763849
chr17 43367454 43368930 ZNF143 GTRD no Epithelial (MCF-7) 21763850
chr17 43367456 43368621 ZNF274 GTRD no Bone Marrow (K562) 21763852
chr17 43367464 43369697 ZNF274 GTRD no Cervix (HeLa-S3) 21763856
chr17 43367469 43369614 ZNF274 GTRD no Liver (HepG2) 21763857
chr17 43367472 43369466 ZNF143 GTRD no Epithelial (MCF-7) 21763858
chr17 43367480 43370062 ZNF274 GTRD no Cervix (HeLa-S3) 21763860
chr17 43367491 43368709 ZNF274 GTRD no Cervix (HeLa-S3) 21763861
chr17 43367496 43369619 ZNF274 GTRD no Liver (HepG2) 21763863
chr17 43367499 43368634 ZNF274 GTRD no Cervix (HeLa-S3) 21763864
chr17 43367502 43369655 ZNF274 GTRD no Liver (HepG2) 21763866
chr17 43367514 43368607 ZNF274 GTRD no Liver (HepG2) 21763871
chr17 43367519 43368937 ZNF143 GTRD no Epithelial (MCF-7) 21763873
chr17 43367519 43369640 ZNF274 GTRD no Liver (HepG2) 21763874
chr17 43367520 43368667 ZNF274 GTRD no Blood (GM12878) 21763875
chr17 43367521 43369901 ZNF274 GTRD no Liver (HepG2) 21763876
chr17 43367531 43369454 ZNF143 GTRD no Epithelial (MCF-7) 21763880
chr17 43367531 43369569 ZNF274 GTRD no Liver (HepG2) 21763881
chr17 43367532 43368719 ZNF274 GTRD no Bone Marrow (K562) 21763883
chr17 43367542 43369575 ZNF274 GTRD no Liver (HepG2) 21763885
chr17 43367551 43369522 ZNF274 GTRD no Liver (HepG2) 21763886
chr17 43367552 43369501 ZNF143 GTRD no Epithelial (MCF-7) 21763887
chr17 43367554 43369060 ZNF274 GTRD no Blood (GM12878) 21763888
chr17 43367565 43369759 ZNF274 GTRD no Blood (GM12878) 21763893
chr17 43367569 43370876 ZNF274 GTRD no Liver (HepG2) 21763895
chr17 43367571 43368765 ZNF274 GTRD no Liver (HepG2) 21763897
chr17 43367572 43368627 ZBTB33 GTRD no Brain (SK-N-SH) 21763898
chr17 43367574 43368607 ZNF274 GTRD no Liver (HepG2) 21763899
chr17 43367578 43369527 ZNF274 GTRD no Liver (HepG2) 21763901
chr17 43367580 43369020 ZNF274 GTRD no Liver (HepG2) 21763902
chr17 43367581 43368720 ZNF274 GTRD no Bone Marrow (K562) 21763903
chr17 43367596 43370267 ZNF274 GTRD no Liver (HepG2) 21763907
chr17 43367605 43369040 ZNF143 GTRD no Epithelial (MCF-7) 21763908
chr17 43367605 43369397 ZBTB33 GTRD no Brain (SK-N-SH) 21763909
chr17 43367613 43369013 ZNF143 GTRD no Epithelial (MCF-7) 21763911
chr17 43367622 43368634 ZNF274 GTRD no Bone Marrow (K562) 21763914
chr17 43367632 43368624 ZNF143 GTRD no Epithelial (MCF-7) 21763920
chr17 43367634 43369139 ZNF143 GTRD no Epithelial (MCF-7) 21763922
chr17 43367638 43368619 ZNF274 GTRD no Blood (GM12878) 21763924
chr17 43367645 43369634 ZNF274 GTRD no Liver (HepG2) 21763927
chr17 43367658 43369558 ZNF274 GTRD no Liver (HepG2) 21763931
chr17 43367661 43369437 ZBTB33 GTRD no Brain (SK-N-SH) 21763933
chr17 43367665 43369047 ZBTB33 GTRD no Brain (SK-N-SH) 21763934
chr17 43367665 43369667 ZNF274 GTRD no Liver (HepG2) 21763935
chr17 43367670 43369557 ZNF274 GTRD no Liver (HepG2) 21763936
chr17 43367693 43368628 ZNF274 GTRD no Blood (GM12878) 21763939
chr17 43367707 43368618 ZNF274 GTRD no Liver (HepG2) 21763943
chr17 43367722 43368835 ZNF274 GTRD no Liver (HepG2) 21763945
chr17 43367738 43368841 ZNF143 GTRD no Epithelial (MCF-7) 21763948
chr17 43367918 43368961 ZBTB33 GTRD no Brain (SK-N-SH) 21763959
chr17 43368064 43369806 TCF7L2 GTRD no Colon (HCT116) 21763961
chr17 43368133 43368659 ZNF143 GTRD no Epithelial (MCF-7) 21763965
chr17 43368164 43369451 TCF7L2 GTRD no Colon (HCT116) 21763966
chr17 43368209 43369448 TCF7L2 GTRD no Colon (HCT116) 21763968
chr17 43368233 43368722 ZNF143 GTRD no Epithelial (MCF-7) 21763969
chr17 43368239 43368951 ZNF274 GTRD no Liver (HepG2) 21763970
chr17 43368246 43369532 ZNF143 GTRD no Epithelial (MCF-7) 21763972
chr17 43368249 43369567 TCF7L2 GTRD no Colon (HCT116) 21763973
chr17 43368258 43368620 ZNF143 GTRD no Epithelial (MCF-7) 21763975
chr17 43368259 43369594 TCF7L2 GTRD no Colon (HCT116) 21763976
chr17 43368261 43369465 ZNF143 GTRD no Epithelial (MCF-7) 21763977
chr17 43368261 43369541 ZNF274 GTRD no Cervix (HeLa-S3) 21763978
chr17 43368266 43368701 TCF7L2 GTRD no Colon (HCT116) 21763979
chr17 43368270 43368700 ZNF143 GTRD no Epithelial (MCF-7) 21763980
chr17 43368272 43368734 ZNF143 GTRD no Epithelial (MCF-7) 21763981
chr17 43368273 43368643 ZNF143 GTRD no Epithelial (MCF-7) 21763982
chr17 43368308 43368612 ZNF274 GTRD no Blood (GM12878) 21763985
chr17 43368328 43369139 ZNF143 GTRD no Epithelial (MCF-7) 21763986
chr17 43368382 43369278 ZNF274 GTRD no Cervix (HeLa-S3) 21763987
chr17 43368537 43369232 ZNF143 GTRD no Epithelial (MCF-7) 21763988
chr17 43368559 43369583 TCF7L2 GTRD no Colon (HCT116) 21763989
chr17 43368563 43368883 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21763990
chr17 43368572 43369468 TCF7L2 GTRD no Colon (HCT116) 21763991
chr17 43368582 43368602 RREB1 JASPAR yes 54440060
chr17 43368587 43369376 TCF7L2 GTRD no Colon (HCT116) 21763992
chr17 43368600 43368870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21763993
Genes associated with rs16939953[chr17:43368600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More