EnhancerDB
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  3. rs16939957[chr17:43370538]
Enhancers that have rs16939957[chr17:43370538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16939957[chr17:43370538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43367280 43370914 ZNF274 GTRD no Liver (HepG2) 21763809
chr17 43367569 43370876 ZNF274 GTRD no Liver (HepG2) 21763895
chr17 43370340 43370900 ZNF143 GTRD no Epithelial (MCF-7) 21764054
chr17 43370349 43370797 ZNF143 GTRD no Epithelial (MCF-7) 21764055
chr17 43370478 43370844 ZNF143 GTRD no Epithelial (MCF-7) 21764056
chr17 43370479 43370890 ZNF143 GTRD no Epithelial (MCF-7) 21764057
chr17 43370483 43370841 ZNF143 GTRD no Epithelial (MCF-7) 21764058
chr17 43370512 43370806 ZNF274 GTRD no Bone Marrow (K562) 21764059
chr17 43370523 43370883 ZNF274 GTRD no Liver (HepG2) 21764060
chr17 43370525 43370839 ZNF274 GTRD no Cervix (HeLa-S3) 21764061
chr17 43370530 43370538 RHOXF1 JASPAR yes 54440294
chr17 43370534 43370722 ZNF274 GTRD no Liver (HepG2) 21764062
chr17 43370534 43370723 ZNF274 GTRD no Liver (HepG2) 21764063
chr17 43370538 43370559 ZNF263 JASPAR yes 54440295
Genes associated with rs16939957[chr17:43370538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More