EnhancerDB
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  3. rs16939958[chr17:43400747]
Enhancers that have rs16939958[chr17:43400747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16939958[chr17:43400747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43397929 43403327 ZNF274 GTRD no Liver (HepG2) 21765058
chr17 43397929 43403327 ZNF274 GTRD no Liver (HepG2) 108264701
chr17 43397992 43403262 ZBTB33 GTRD no Lung (A549) 108264704
chr17 43398043 43403138 ZBTB33 GTRD no Lung (A549) 108264707
chr17 43398132 43401990 ZBTB33 GTRD no Lung (A549) 108264715
chr17 43398150 43400856 ZNF274 GTRD no Cervix (HeLa-S3) 21765066
chr17 43398150 43400856 ZNF274 GTRD no Cervix (HeLa-S3) 108264717
chr17 43398158 43400763 ZNF274 GTRD no Cervix (HeLa-S3) 21765067
chr17 43398158 43400763 ZNF274 GTRD no Cervix (HeLa-S3) 108264720
chr17 43400666 43401343 ZNF274 GTRD no Bone Marrow (K562) 21765233
chr17 43400742 43400756 ZIC1 JASPAR yes 54444728
Genes associated with rs16939958[chr17:43400747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More