EnhancerDB
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  3. rs16942526[chr17:56004181]
Enhancers that have rs16942526[chr17:56004181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16942526[chr17:56004181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56004174 56004183 CDX1 JASPAR yes 55000419
chr17 56004174 56004184 HOXA13 JASPAR yes 55000420
chr17 56004174 56004184 HOXB13 JASPAR yes 55000421
Genes associated with rs16942526[chr17:56004181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More