EnhancerDB
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  3. rs16942528[chr17:56005604]
Enhancers that have rs16942528[chr17:56005604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16942528[chr17:56005604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56005598 56005608 ELK1 JASPAR yes 55000640
chr17 56005599 56005610 ETV2 JASPAR yes 55000641
chr17 56005600 56005609 ELK4 JASPAR yes 55000642
chr17 56005600 56005610 NFATC3 JASPAR yes 55000643
chr17 56005602 56005608 ETS1 JASPAR yes 55000644
Genes associated with rs16942528[chr17:56005604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More