EnhancerDB
  1. Home
  2. SNP
  3. rs16949470[chr17:48988250]
Enhancers that have rs16949470[chr17:48988250]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16949470[chr17:48988250]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48988231 48988250 CTCF JASPAR yes 54732626
chr17 48988241 48988251 NFIA JASPAR yes 54732627
chr17 48988242 48988251 NFIX JASPAR yes 54732628
Genes associated with rs16949470[chr17:48988250], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 49254786 49337524 - MBTD1 ENSG00000011258.11 49337524 266536 Uterus 0.103135 16051